Ozbek, O., Ulgen, K. O., and Ileri Ercan, N., 2021. “The Toxicity of Polystyrene-Based Nanoparticles in Saccharomyces cerevisiae Is Associated with Nanoparticle Charge and Uptake Mechanism”. Chemical Research in Toxicology, 34, 4, 1055–1068.
Gul, G., Yildirim, R., and Ileri Ercan, N., 2021. “Cytotoxicity analysis of nanoparticles by association rule mining”. Environmental Science: Nano, 8, 937-949.
Gul, G., and Ileri Ercan, N., 2021. “Fullerene translocation through peroxidized lipid membranes”. RSC Advances, 11, 7575-7586.
Ileri Ercan, N., 2019. “Understanding Interactions of Curcumin with Lipid Bilayers: A coarse grained Molecular Dynamics Study”. Journal of Chemical Information and Modeling, 10, 4413-4426.
Ileri Ercan, N., 2019. “Pore length- and ion concentration-dependent ionic current in cylindrical nanopores: an atomistic molecular dynamics study”. Turkish Journal of Chemistry, 43, 520-530.
Ileri Ercan, N., Stroeve, P., Tringe, J.W., Faller R., 2018. “Molecular Dynamics Modeling of Methylene Blue-DOPC Lipid Bilayer Interactions”. Langmuir, 34 (14), 4314-4323.
Yu, E., Lo, A., Jiang, L., Petkus, B., Ileri Ercan, N., and Stroeve, P., 2017. “Improved controlled release of protein from expanded-pore mesoporous silica nanoparticles modified with co-functionalized poly (n-isopropylacrylamide) and poly (ethylene glycol)(PNIPAM-PEG)”. Colloids and Surfaces B: Biointerfaces, 149, pp.297-300.
Ercan, N., Stroeve, P., Tringe, J. W., and Faller, R., 2016. “Understanding the Interaction of Pluronics L61 and L64 with a DOPC Lipid Bilayer: An Atomistic Molecular Dynamics Study”. Langmuir, 32(39), 10026-10033.
Tringe J.W., Ileri N., Levie H. W., Stroeve P., Faller R., Renaud P., 2015. “Molecular Dynamics and Monte Carlo Simulations Resolve Apparent Diffusion Rate Differences for Proteins Confined in Nanochannels”, Chemical Physics, 457, 19.
Ileri N., Goldman N., 2014. “Graphene and nano-diamond synthesis in expansions of molten liquid carbon”, Journal Chemical Physics, 141 (16), 164709.
Ileri N., Fried E. L., 2014. “Quantum Molecular Dynamic Simulations of Liquid Benzene using Orbital Optimization”, Theoretical Chemistry Accounts, 133, 1575.
Ileri N., Faller R., Palazoglu A., Létant S. E., Tringe J. W., and Stroeve P., 2013. “Molecular transport of proteins through nanoporous membranes fabricated by interferometric lithography”, PCCP, 15, 965-971.
Yang X., Ileri N., Larson C. C., Carlson T. C., Britten J. A., Gu C., Bond T. C., 2012. “Nanopillar array on a fiber facet for highly sensitive surface-enhanced Raman scattering”, Optics Express, 20(22), 24819-24826.
Ileri N., Létant S. E., Palazoglu A., Stroeve P., Tringe J. W., and Faller R., 2012. “Mesoscale simulations of biomolecular transport through nanofilters with tapered and cylindrical geometries”, PCCP, 14, 15066-15077.
Ileri N., Stroeve P., Palazoglu A., Faller R., Zaidi S. H., Nguyen H. T., Britten J. A., Létant S.E, and Tringe J. W., 2012. “Fabrication of functional silicon-based nanoporous membranes”, Journal of Micro/Nanolithography, MEMs, MOEMs, 11(1), 013012.
Stroeve P. and Ileri N., 2011. “Biotechnical and other applications of nanoporous membranes”, Trends in Biotechnology, 29(6), 259-266.
Ku J.R., Lai S.H., Ileri N., Ramírez P., Mafé S., and Stroeve P., 2007. “pH and Ionic Strength Effects on Amino Acid Transport through Au-Nanotubule Membranes Charged with SelfAssembled Monolayers”, J. Phys. Chem., 111(7), 2965-73.
Ileri N., Calik P., and Sengul A., 2007. “Phosphate enrichment and fed-batch operation for prolonged β-lactamase production by Bacillus licheniformis”, Journal of Applied Microbiology, 102(5), 1418-26.
Ileri N., and Calik P., 2006. “Effects of pH Strategy on endo- and exo-Metabolome Profiles and Sodium Potassium Hydrogen Ports of β-Lactamase-Producing Bacillus licheniformis”, Biotechnology Progress, 22 (2), 411-19.
Calik P., Ileri N., Erdinc B.I., Aydogan N., and Argun M., 2005. “A novel anti-foam for fermentation processes: fluorocarbon-hydrocarbon unsymmetrical bolaform surfactant”, Langmuir, 21(19), 8613-19.
Patents
Yang X., Bond T. C., Britten J. A., Carlson T. C., Gu C., Ileri N., Larson C. C., “Nanoscale structures on optical fiber for surface enhanced raman scattering and methods related thereto”. U.S. Patent Application No.: 13/901,448.
Conference Proceedings
Chang A.S.P., Maiti A., Ileri N., Bora M., Larson C. C., Britten J. A., Bond T. C., 2012. “Detection of volatile organic compounds by surface enhanced Raman scattering”, SPIE Proceedings 8366, Advanced Environmental, Chemical, and Biological Sensing Technologies IX, 83660S.
Ileri N., Létant S. E., Britten J. A., Nguyen H., Larson C. C., Zaidi S., Palazoglu A., Faller R., Tringe J. W. and Stroeve P., 2009. “Efficient Nanoporous Silicon Membranes for Integrated Microfluidic Separation and Sensing Systems”, Proceedings of the 2009 MRS Spring Meeting Symposium OO.
